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ProkaryMetrics Documentation

Date:June 20, 2012

ProkaryMetrics is a software package providing tools to analyze microbial biofilms through the 3D reconstruction of fluorescent microscopy image data and the manual annotation of bacteria. ProkaryMetrics allows full 3D interaction with such data sets and provides users with visual and quantitative analysis tools to gather quantitative measurements on individuals as well as the biofilm as a whole.


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